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Refactor packages into modular structure under packages/ directory

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Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
This commit is contained in:
copilot-swe-agent[bot] 2026-01-19 05:06:39 +00:00
commit c365b44ff2
7 changed files with 116 additions and 75 deletions
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76
flake.nix
View file

@ -40,81 +40,7 @@
extraRPackageDeps = {
julia-fwildclusterboot = prev.julia-bin.withPackages ["WildBootTests" "StableRNGs"];
};
extraRPackages = let
fetchfromGitHubJSONFile = path: prev.fetchFromGitHub (builtins.fromJSON (builtins.readFile path));
in {
## F
fwildclusterboot =
(prev.rPackages.buildRPackage {
name = "fwildclusterboot";
src = fetchfromGitHubJSONFile ./versions/fwildclusterboot.json;
propagatedBuildInputs = builtins.attrValues {
inherit
(prev.rPackages)
collapse
dqrng
dreamerr
Formula
generics
gtools
JuliaConnectoR
Matrix
Rcpp
rlang
RcppArmadillo
RcppEigen
;
inherit (final.extraRPackages) summclust;
};
}).overrideAttrs (old: {
passthru = (old.passthru or {}) // {juliaPackages = ["WildBootTests" "StableRNGs"];};
});
## H
httpgd = prev.rPackages.buildRPackage {
name = "httpgd";
src = fetchfromGitHubJSONFile ./versions/httpgd.json;
propagatedBuildInputs = builtins.attrValues {
inherit
(prev.rPackages)
unigd
cpp11
AsioHeaders
;
};
};
## M
musicMetadata = prev.rPackages.buildRPackage {
name = "musicMetadata";
src = fetchfromGitHubJSONFile ./versions/musicMetadata.json;
};
## S
summclust = prev.rPackages.buildRPackage {
name = "summclust";
src = fetchfromGitHubJSONFile ./versions/summclust.json;
propagatedBuildInputs = builtins.attrValues {
inherit
(prev.rPackages)
dreamerr
MASS
collapse
generics
cli
rlang
;
};
};
synthdid = prev.rPackages.buildRPackage {
name = "synthdid";
src = fetchfromGitHubJSONFile ./versions/synthdid.json;
propagatedBuildInputs = [prev.rPackages.mvtnorm];
};
};
extraRPackages = import ./packages {inherit final prev;};
};
in {
# Helper to install R with system dependencies if required

29
packages/default.nix Normal file
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@ -0,0 +1,29 @@
{
final,
prev,
}:
let
# Shared helper function to fetch from GitHub using JSON version files
fetchfromGitHubJSONFile = path: prev.fetchFromGitHub (builtins.fromJSON (builtins.readFile path));
# Reference to the versions directory at the repo root
versionsDir = ../versions;
# Common arguments passed to all package modules
commonArgs = {
inherit final prev fetchfromGitHubJSONFile versionsDir;
};
in {
## F
fwildclusterboot = import ./f/fwildclusterboot.nix commonArgs;
## H
httpgd = import ./h/httpgd.nix commonArgs;
## M
musicMetadata = import ./m/musicMetadata.nix commonArgs;
## S
summclust = import ./s/summclust.nix commonArgs;
synthdid = import ./s/synthdid.nix commonArgs;
}

30
packages/f/fwildclusterboot.nix Normal file
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@ -0,0 +1,30 @@
{
final,
prev,
fetchfromGitHubJSONFile,
versionsDir,
}:
(prev.rPackages.buildRPackage {
name = "fwildclusterboot";
src = fetchfromGitHubJSONFile "${versionsDir}/fwildclusterboot.json";
propagatedBuildInputs = builtins.attrValues {
inherit
(prev.rPackages)
collapse
dqrng
dreamerr
Formula
generics
gtools
JuliaConnectoR
Matrix
Rcpp
rlang
RcppArmadillo
RcppEigen
;
inherit (final.extraRPackages) summclust;
};
}).overrideAttrs (old: {
passthru = (old.passthru or {}) // {juliaPackages = ["WildBootTests" "StableRNGs"];};
})

17
packages/h/httpgd.nix Normal file
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@ -0,0 +1,17 @@
{
prev,
fetchfromGitHubJSONFile,
versionsDir,
}:
prev.rPackages.buildRPackage {
name = "httpgd";
src = fetchfromGitHubJSONFile "${versionsDir}/httpgd.json";
propagatedBuildInputs = builtins.attrValues {
inherit
(prev.rPackages)
unigd
cpp11
AsioHeaders
;
};
}

9
packages/m/musicMetadata.nix Normal file
View file

@ -0,0 +1,9 @@
{
prev,
fetchfromGitHubJSONFile,
versionsDir,
}:
prev.rPackages.buildRPackage {
name = "musicMetadata";
src = fetchfromGitHubJSONFile "${versionsDir}/musicMetadata.json";
}

20
packages/s/summclust.nix Normal file
View file

@ -0,0 +1,20 @@
{
prev,
fetchfromGitHubJSONFile,
versionsDir,
}:
prev.rPackages.buildRPackage {
name = "summclust";
src = fetchfromGitHubJSONFile "${versionsDir}/summclust.json";
propagatedBuildInputs = builtins.attrValues {
inherit
(prev.rPackages)
dreamerr
MASS
collapse
generics
cli
rlang
;
};
}

10
packages/s/synthdid.nix Normal file
View file

@ -0,0 +1,10 @@
{
prev,
fetchfromGitHubJSONFile,
versionsDir,
}:
prev.rPackages.buildRPackage {
name = "synthdid";
src = fetchfromGitHubJSONFile "${versionsDir}/synthdid.json";
propagatedBuildInputs = [prev.rPackages.mvtnorm];
}