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152 commits

Author SHA1 Message Date
copilot-swe-agent[bot]
5ac0c775ef Update README with ED template documentation 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-02-16 00:07:47 +00:00
Daniel
274972e8a4
 		Update flake.nix 2026-02-16 10:59:10 +11:00
github-actions[bot]
1fca4c0330 [create-pull-request] automated change 2026-02-15 06:59:45 +00:00
github-actions[bot]
4662b867bd flake.lock: Update 
Flake lock file updates:

• Updated input 'fran':
    'github:dwinkler1/fran/c5c7f360c7954b422918b2136087f5d3a8f4937f?narHash=sha256-3LWIQnTBSV3eMliFhk1K5cEAJokJVnnoChY0lcDzqNM%3D' (2026-02-10)
  → 'github:dwinkler1/fran/68b189ab981adae06590ee1929a70c8b86afd2b8?narHash=sha256-DvHfkW3DctWV%2BYnigY4%2B5Stn9NgI38JqR2IScXDX8z8%3D' (2026-02-15)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/6c5e707c6b5339359a9a9e215c5e66d6d802fd7a?narHash=sha256-iKZMkr6Cm9JzWlRYW/VPoL0A9jVKtZYiU4zSrVeetIs%3D' (2026-02-11)
  → 'github:NixOS/nixpkgs/3aadb7ca9eac2891d52a9dec199d9580a6e2bf44?narHash=sha256-O1XDr7EWbRp%2BkHrNNgLWgIrB0/US5wvw9K6RERWAj6I%3D' (2026-02-14)
 2026-02-15 06:59:44 +00:00
github-actions[bot]
a1e803a023 [create-pull-request] automated change 2026-02-12 07:10:13 +00:00
github-actions[bot]
b362614076 flake.lock: Update 
Flake lock file updates:

• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/2db38e08fdadcc0ce3232f7279bab59a15b94482?narHash=sha256-1jZvgZoAagZZB6NwGRv2T2ezPy%2BX6EFDsJm%2BYSlsvEs%3D' (2026-02-09)
  → 'github:NixOS/nixpkgs/6c5e707c6b5339359a9a9e215c5e66d6d802fd7a?narHash=sha256-iKZMkr6Cm9JzWlRYW/VPoL0A9jVKtZYiU4zSrVeetIs%3D' (2026-02-11)
 2026-02-12 07:10:12 +00:00
github-actions[bot]
1376f8ddc5 [create-pull-request] automated change 2026-02-11 07:11:50 +00:00
github-actions[bot]
2863733742 flake.lock: Update 
Flake lock file updates:

• Updated input 'fran':
    'github:dwinkler1/fran/a3879317519fd3685f3b7679a1de4c5ae65a7cb9?narHash=sha256-czGb4RwTBahNNK9S7ySXeTWIrn/jKH%2B74hN/uIS2XrM%3D' (2026-01-19)
  → 'github:dwinkler1/fran/c5c7f360c7954b422918b2136087f5d3a8f4937f?narHash=sha256-3LWIQnTBSV3eMliFhk1K5cEAJokJVnnoChY0lcDzqNM%3D' (2026-02-10)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/fa83fd837f3098e3e678e6cf017b2b36102c7211?narHash=sha256-e7VO/kGLgRMbWtpBqdWl0uFg8Y2XWFMdz0uUJvlML8o%3D' (2026-01-28)
  → 'github:NixOS/nixpkgs/2db38e08fdadcc0ce3232f7279bab59a15b94482?narHash=sha256-1jZvgZoAagZZB6NwGRv2T2ezPy%2BX6EFDsJm%2BYSlsvEs%3D' (2026-02-09)
• Updated input 'nvimConfig':
    'github:dwinkler1/nvimConfig/f0d0d3c4ec0c0345508ac3217ec9bf999335fef4?narHash=sha256-skscpI6AkHV93iecNah21HSVr59AEGimA51kmQ7UOtg%3D' (2026-01-30)
  → 'github:dwinkler1/nvimConfig/8f5c05252e914cb3738039a7ec13eb7d5955227a?narHash=sha256-gem34C89cocBGuWLj7cdrAS5WkrOBp6V%2BycQM/RhcCw%3D' (2026-02-04)
• Updated input 'rixpkgs':
    'github:rstats-on-nix/nixpkgs/4cf98f12168c1974a040ea34756f8dec5cfc793e?narHash=sha256-Z63gLlvj2WnJoi/3/3oOLBipuYII%2BsfTT1C%2B8BTt%2B5c%3D' (2026-01-26)
  → 'github:rstats-on-nix/nixpkgs/0d3fe7afce51d2126fdccf0b717d8048b90e4781?narHash=sha256-Pi8f3LPTFmG7SZeAJEAamOWly1SZhEofT92uBqS4atY%3D' (2026-02-02)
 2026-02-11 07:11:49 +00:00
Daniel Winkler
5646308c21 reorganization 2026-01-31 03:09:40 +11:00
Daniel Winkler
0d7caccf06 allow extra runtime deps 2026-01-31 02:56:31 +11:00
Daniel Winkler
a337a9cf1e do track R files 2026-01-31 02:39:43 +11:00
Daniel Winkler
785cdaaa91 added env vars 2026-01-31 02:38:50 +11:00
Daniel Winkler
94b25e5b5c corrected override inputs 2026-01-31 00:46:27 +11:00
Daniel
f561def1a6
 		Merge pull request #66 from dwinkler1/update_rde 
Update RDE flake.lock
 2026-01-27 15:51:44 +11:00
github-actions[bot]
8d6ea0b0d5 [create-pull-request] automated change 2026-01-27 00:26:17 +00:00
Daniel
d22cc8f331
 		Remove nvimcom input from fran in flake.nix 
Removed nvimcom input from fran configuration.
 2026-01-27 11:25:26 +11:00
github-actions[bot]
0f7687bc39 [create-pull-request] automated change 2026-01-24 06:40:55 +00:00
github-actions[bot]
c703bf420a [create-pull-request] automated change 2026-01-18 06:39:48 +00:00
Daniel Winkler
c3bc8f74a6 Cleanup 2026-01-16 19:47:23 +11:00
Daniel Winkler
39311f1822 Update 2026-01-16 19:13:55 +11:00
Daniel
beda7e9069
 		Merge pull request #57 from dwinkler1/update_rde 2026-01-13 21:40:25 +11:00
copilot-swe-agent[bot]
8efae381e9 Make quarto and uv available directly in dev shell 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-13 10:14:44 +00:00
github-actions[bot]
703690472a [create-pull-request] automated change 2026-01-13 06:43:33 +00:00
copilot-swe-agent[bot]
0514ba1283 Add comprehensive CI documentation to README files 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 20:34:23 +00:00
copilot-swe-agent[bot]
0273515951 Add robust command availability checks to all shell scripts 
- Add check for @defaultPackageName@-devenv in activateDevenv.sh
- Add check for uv command in initPython.sh
- Add check for git command in initProject.sh (with graceful degradation)
- Add checks for wget, sed, nix in updateDeps.sh
- Provide clear error messages when commands are not available
- Prevent scripts from failing with cryptic errors when tools are missing

Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 20:11:12 +00:00
copilot-swe-agent[bot]
8fc712be60 Remove trailing whitespace from all files (nitpick) 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:58:58 +00:00
copilot-swe-agent[bot]
2a5a1acd62 Fix runtime errors and improve robustness in host configs and scripts 
- Fix KeyError in julia.nix when Project.toml lacks deps table
- Fix incorrect uv args in python.nix (remove --run + --add-flags combination)
- Remove redundant 'uv add ipython' from sync branch in python.nix
- Fix relative paths in project-scripts.nix (./scripts -> ../scripts)
- Fix initProject.sh to check file existence before git add
- Add RVER validation in updateDeps.sh with proper error handling
- Add tool availability checks in updateDeps.sh (uv, julia, devenv)
- Add flake.nix backup before modification in updateDeps.sh
- Ensure updateDeps.sh runs from repository root

Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:48:19 +00:00
copilot-swe-agent[bot]
40095ac868 Add comprehensive inline documentation to all modules and enhance README 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:40:13 +00:00
copilot-swe-agent[bot]
c19248f706 Add comprehensive SUMMARY.md with complete refactoring overview 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:33:15 +00:00
copilot-swe-agent[bot]
cc69aa34f8 Add clarifying comments based on code review feedback 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:32:05 +00:00
copilot-swe-agent[bot]
496c238a12 Add inline comments and extract Lua config for better clarity 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:30:14 +00:00
copilot-swe-agent[bot]
eaecb56186 Extract shell hook to lib/shell-hook.nix for better organization 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:28:09 +00:00
copilot-swe-agent[bot]
3398a72241 Refactor template: extract scripts, overlays, and hosts into separate modules 
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
 2026-01-11 19:26:17 +00:00
github-actions[bot]
52594bfec2 [create-pull-request] automated change 2025-12-18 06:41:49 +00:00
Daniel Winkler
7bb988ef7d fixed R.nvim 2025-12-11 15:00:29 +11:00
Daniel Winkler
5c22c25853 pin R.nvim to compatible version 2025-12-03 11:33:19 +11:00
github-actions[bot]
8a1f4683e9 [create-pull-request] automated change 2025-10-03 06:34:35 +00:00
github-actions[bot]
c70cb27d3d [create-pull-request] automated change 2025-09-30 06:37:00 +00:00
github-actions[bot]
8c6f283cde [create-pull-request] automated change 2025-09-29 06:37:36 +00:00
github-actions[bot]
6e4902ab96 [create-pull-request] automated change 2025-09-26 06:35:13 +00:00
github-actions[bot]
0c2ccb0d4a [create-pull-request] automated change 2025-09-23 06:36:24 +00:00
github-actions[bot]
8bae293da4 [create-pull-request] automated change 2025-09-22 06:37:59 +00:00
github-actions[bot]
ef83c56fde [create-pull-request] automated change 2025-09-20 06:32:50 +00:00
github-actions[bot]
14a8607392 [create-pull-request] automated change 2025-09-19 06:35:17 +00:00
github-actions[bot]
2a1f500f39 [create-pull-request] automated change 2025-09-18 06:35:25 +00:00
github-actions[bot]
b30d239c2a [create-pull-request] automated change 2025-09-17 06:36:22 +00:00
github-actions[bot]
77f0408435 [create-pull-request] automated change 2025-09-16 06:35:52 +00:00
github-actions[bot]
8afc72cda7 [create-pull-request] automated change 2025-09-14 06:32:33 +00:00
github-actions[bot]
c526b5d753 [create-pull-request] automated change 2025-09-13 06:31:48 +00:00
github-actions[bot]
491da07860 [create-pull-request] automated change 2025-09-11 03:31:28 +00:00