Commit graph

163 commits

Author SHA1 Message Date
5d8c198afa More robust shell setup with nu 2026-05-23 02:27:20 +10:00
e814d2c04c simplified 2026-05-21 21:43:04 +10:00
5c851aecba temp 2026-05-21 20:38:02 +10:00
github-actions[bot]
24175e36c3 flake.lock: Update
Flake lock file updates:

• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/15f4ee454b1dce334612fa6843b3e05cf546efab?narHash=sha256-Ad49moKWeXtKBJNy2ebiTQUEgdLyvGmTeykAQ9xM%2BZ4%3D' (2026-04-30)
  → 'github:NixOS/nixpkgs/549bd84d6279f9852cae6225e372cc67fb91a4c1?narHash=sha256-hGdgeU2Nk87RAuZyYjyDjFL6LK7dAZN5RE9%2BhrDTkDU%3D' (2026-05-05)
• Updated input 'nvimConfig':
    'github:dwinkler1/nvimConfig/e9c99811d4b8684814608c7bff89dd5bb4d20cda?narHash=sha256-PY%2BhOXV5%2BW0rpWtnUI9QO3tFyyzlpDG8rVjPbaBoHxo%3D' (2026-05-03)
  → 'github:dwinkler1/nvimConfig/4884bf685f157da4f4d60f8e40febeac0b9bf0e9?narHash=sha256-FB8M8D8YzfSe/oL4l6XGJxErq6nRjWSAeJzNXpk2g0E%3D' (2026-05-07)
• Updated input 'nvimConfig/wrappers':
    'github:BirdeeHub/nix-wrapper-modules/f11469ca69068bac13d9e163b2bd268cc06dff57?narHash=sha256-/SSAR77Brr9fbapsh1cb2K47JXCbvwS1GjM4yyDxle8%3D' (2026-04-16)
  → 'github:BirdeeHub/nix-wrapper-modules/dc5184095ad488e937ec308b52c9c0b218959d8b?narHash=sha256-0DS24OW9d9iz%2Bw0LCz6KpS2IpE2z2gHxeBdMZg9xpDY%3D' (2026-05-05)
• Updated input 'rixpkgs':
    'github:dwinkler1/rixpkgs/af2dd3f7b4b172077747c0869d4e30702fb71b0e?narHash=sha256-tgveHozOJ2D/mi3LxVy/FcmLFDlM5XKZxsNB2XpvzaM%3D' (2026-02-17)
  → 'github:dwinkler1/rixpkgs/028af91e9161008fce750f3e249afe471a302037?narHash=sha256-K%2BRz%2BpghAmynE83%2Be9svnNYsDgPnbEohrcPb6duG5wM%3D' (2026-05-07)
2026-05-07 08:40:44 +00:00
github-actions[bot]
c1c92ec37c flake.lock: Update
Flake lock file updates:

• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/0726a0ecb6d4e08f6adced58726b95db924cef57?narHash=sha256-EHq1/OX139R1RvBzOJ0aMRT3xnWyqtHBRUBuO1gFzjI%3D' (2026-04-22)
  → 'github:NixOS/nixpkgs/15f4ee454b1dce334612fa6843b3e05cf546efab?narHash=sha256-Ad49moKWeXtKBJNy2ebiTQUEgdLyvGmTeykAQ9xM%2BZ4%3D' (2026-04-30)
• Updated input 'nvimConfig':
    'github:dwinkler1/nvimConfig/2617face3b1be40534d2cae7f0a374a062b3710d?narHash=sha256-pU3u7T4MqpjUWxflNvd4i47FURp756L7nMRL8MV%2BQEw%3D' (2026-04-17)
  → 'github:dwinkler1/nvimConfig/e9c99811d4b8684814608c7bff89dd5bb4d20cda?narHash=sha256-PY%2BhOXV5%2BW0rpWtnUI9QO3tFyyzlpDG8rVjPbaBoHxo%3D' (2026-05-03)
2026-05-03 06:40:30 +00:00
github-actions[bot]
1f974e4167 [create-pull-request] automated change 2026-04-28 01:44:17 +00:00
github-actions[bot]
a251890273 flake.lock: Update
Flake lock file updates:

• Updated input 'fran':
    'github:dwinkler1/fran/7b8fbbcd0c55df98795a9e34621e6224b6713b5b?narHash=sha256-N3mUOwFwGBaFomNdlWuCRftzqy%2Bh9Io8PJGcMVtJJsY%3D' (2026-02-19)
  → 'github:dwinkler1/fran/da09626e4dd8f0f57078b3a04e0443a8c20defa1?narHash=sha256-xqqv46MTveuT4yJH2YihmbHGy5mdLnnLFDebVmUws/E%3D' (2026-04-17)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/54170c54449ea4d6725efd30d719c5e505f1c10e?narHash=sha256-t%2BHZK42pB6N%2Bi5RGbuy7Xluez/VvWbembBdvzsc23Ss%3D' (2026-04-10)
  → 'github:NixOS/nixpkgs/0726a0ecb6d4e08f6adced58726b95db924cef57?narHash=sha256-EHq1/OX139R1RvBzOJ0aMRT3xnWyqtHBRUBuO1gFzjI%3D' (2026-04-22)
• Updated input 'nvimConfig':
    'github:dwinkler1/nvimConfig/38d3d49665bc65bc2b0ab82270e9296a94a19c8f?narHash=sha256-6hRdCsXZhWi0ZzkGdMmCjuOagOkTBowT4/nR7H/CsSI%3D' (2026-04-01)
  → 'github:dwinkler1/nvimConfig/2617face3b1be40534d2cae7f0a374a062b3710d?narHash=sha256-pU3u7T4MqpjUWxflNvd4i47FURp756L7nMRL8MV%2BQEw%3D' (2026-04-17)
• Updated input 'nvimConfig/plugins-r':
    'github:R-nvim/R.nvim/5b9c870fbb5c61126d30e6b277695d6f3c54da5b?narHash=sha256-qfT4htOqZI%2BJEM2t3I/iuGu2XPu7vNmu4Fkj%2B2seKgE%3D' (2026-03-31)
  → follows 'plugins-r'
• Updated input 'nvimConfig/wrappers':
    'github:BirdeeHub/nix-wrapper-modules/bab35ffae25cf6f4e4fdb3c2f7f0ac80966ce737?narHash=sha256-a6JZDuBIwQmuEwYM4dziH%2BWyrpE8HCP8F7JFIn3CNvw%3D' (2026-03-30)
  → 'github:BirdeeHub/nix-wrapper-modules/f11469ca69068bac13d9e163b2bd268cc06dff57?narHash=sha256-/SSAR77Brr9fbapsh1cb2K47JXCbvwS1GjM4yyDxle8%3D' (2026-04-16)
• Added input 'plugins-r':
    'github:R-nvim/R.nvim/958b472d763cb258927c7ef69af4fd9945cc5469?narHash=sha256-oQSHHu6filJkAyH94yEvyTVuxA%2B5MU2dMOEAnsIjJKQ%3D' (2026-01-31)
2026-04-28 01:44:15 +00:00
893b92a863
Update nixpkgs URL to point to unstable branch 2026-04-23 19:07:46 +10:00
github-actions[bot]
c7e81b4d51 [create-pull-request] automated change 2026-04-11 07:09:22 +00:00
github-actions[bot]
a5a36052e1 flake.lock: Update
Flake lock file updates:

• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/107cba9eb4a8d8c9f8e9e61266d78d340867913a?narHash=sha256-Tsq9BCz0q47ej1uFF39m4tuhcwru/ls6vCCJzutEpaw%3D' (2026-03-29)
  → 'github:NixOS/nixpkgs/54170c54449ea4d6725efd30d719c5e505f1c10e?narHash=sha256-t%2BHZK42pB6N%2Bi5RGbuy7Xluez/VvWbembBdvzsc23Ss%3D' (2026-04-10)
• Updated input 'nvimConfig':
    'github:dwinkler1/nvimConfig/e3d29331298bee03d2dd78d0bd3327a6a121f95f?narHash=sha256-k7WEQZtvDgOfAGyAFELfzJigwUYpzFlW7sRjZbxrBnc%3D' (2026-02-18)
  → 'github:dwinkler1/nvimConfig/38d3d49665bc65bc2b0ab82270e9296a94a19c8f?narHash=sha256-6hRdCsXZhWi0ZzkGdMmCjuOagOkTBowT4/nR7H/CsSI%3D' (2026-04-01)
• Updated input 'nvimConfig/plugins-r':
    'github:R-nvim/R.nvim/659dc18aba2d2b799c04efbce66a15ea87bd6ec6?narHash=sha256-vI5XW33cNJdHdVAtLSSbKb5ROdSbeOMb23lXTUbgva8%3D' (2026-02-09)
  → 'github:R-nvim/R.nvim/5b9c870fbb5c61126d30e6b277695d6f3c54da5b?narHash=sha256-qfT4htOqZI%2BJEM2t3I/iuGu2XPu7vNmu4Fkj%2B2seKgE%3D' (2026-03-31)
• Updated input 'nvimConfig/wrappers':
    'github:BirdeeHub/nix-wrapper-modules/8ba8703b62c2cc7e642f58ff03bd14a2f836e07a?narHash=sha256-Ibv5WEXiwr6gIEOajD4QE93TYpXUhEYv1VZV8sdU3IQ%3D' (2026-02-15)
  → 'github:BirdeeHub/nix-wrapper-modules/bab35ffae25cf6f4e4fdb3c2f7f0ac80966ce737?narHash=sha256-a6JZDuBIwQmuEwYM4dziH%2BWyrpE8HCP8F7JFIn3CNvw%3D' (2026-03-30)
2026-04-11 07:09:21 +00:00
github-actions[bot]
39aa4b2aef [create-pull-request] automated change 2026-03-31 07:25:56 +00:00
github-actions[bot]
25bac48f19 flake.lock: Update
Flake lock file updates:

• Updated input 'fran':
    'github:dwinkler1/fran/68b189ab981adae06590ee1929a70c8b86afd2b8?narHash=sha256-DvHfkW3DctWV%2BYnigY4%2B5Stn9NgI38JqR2IScXDX8z8%3D' (2026-02-15)
  → 'github:dwinkler1/fran/7b8fbbcd0c55df98795a9e34621e6224b6713b5b?narHash=sha256-N3mUOwFwGBaFomNdlWuCRftzqy%2Bh9Io8PJGcMVtJJsY%3D' (2026-02-19)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/3aadb7ca9eac2891d52a9dec199d9580a6e2bf44?narHash=sha256-O1XDr7EWbRp%2BkHrNNgLWgIrB0/US5wvw9K6RERWAj6I%3D' (2026-02-14)
  → 'github:NixOS/nixpkgs/107cba9eb4a8d8c9f8e9e61266d78d340867913a?narHash=sha256-Tsq9BCz0q47ej1uFF39m4tuhcwru/ls6vCCJzutEpaw%3D' (2026-03-29)
• Updated input 'nvimConfig':
    'github:dwinkler1/nvimConfig/8f5c05252e914cb3738039a7ec13eb7d5955227a?narHash=sha256-gem34C89cocBGuWLj7cdrAS5WkrOBp6V%2BycQM/RhcCw%3D' (2026-02-04)
  → 'github:dwinkler1/nvimConfig/e3d29331298bee03d2dd78d0bd3327a6a121f95f?narHash=sha256-k7WEQZtvDgOfAGyAFELfzJigwUYpzFlW7sRjZbxrBnc%3D' (2026-02-18)
• Updated input 'nvimConfig/plugins-r':
    'github:R-nvim/R.nvim/2701ec64f5485e17c0e057081a9ae2058d776464?narHash=sha256-T4QgcBL%2BLCXvrEiRE2JW4jtUKl8DKzFHk8czGUO1jgY%3D' (2026-01-30)
  → 'github:R-nvim/R.nvim/659dc18aba2d2b799c04efbce66a15ea87bd6ec6?narHash=sha256-vI5XW33cNJdHdVAtLSSbKb5ROdSbeOMb23lXTUbgva8%3D' (2026-02-09)
• Updated input 'nvimConfig/wrappers':
    'github:BirdeeHub/nix-wrapper-modules/cc5e052dd1e93ae75dc06e3fabf46f0820c272f2?narHash=sha256-Fq6THKEiAKx%2BwWQ4wTg9HvOAyD6i8JkWfHVQDZH7Byo%3D' (2026-01-30)
  → 'github:BirdeeHub/nix-wrapper-modules/8ba8703b62c2cc7e642f58ff03bd14a2f836e07a?narHash=sha256-Ibv5WEXiwr6gIEOajD4QE93TYpXUhEYv1VZV8sdU3IQ%3D' (2026-02-15)
2026-03-31 07:25:55 +00:00
274972e8a4
Update flake.nix 2026-02-16 10:59:10 +11:00
github-actions[bot]
1fca4c0330 [create-pull-request] automated change 2026-02-15 06:59:45 +00:00
github-actions[bot]
4662b867bd flake.lock: Update
Flake lock file updates:

• Updated input 'fran':
    'github:dwinkler1/fran/c5c7f360c7954b422918b2136087f5d3a8f4937f?narHash=sha256-3LWIQnTBSV3eMliFhk1K5cEAJokJVnnoChY0lcDzqNM%3D' (2026-02-10)
  → 'github:dwinkler1/fran/68b189ab981adae06590ee1929a70c8b86afd2b8?narHash=sha256-DvHfkW3DctWV%2BYnigY4%2B5Stn9NgI38JqR2IScXDX8z8%3D' (2026-02-15)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/6c5e707c6b5339359a9a9e215c5e66d6d802fd7a?narHash=sha256-iKZMkr6Cm9JzWlRYW/VPoL0A9jVKtZYiU4zSrVeetIs%3D' (2026-02-11)
  → 'github:NixOS/nixpkgs/3aadb7ca9eac2891d52a9dec199d9580a6e2bf44?narHash=sha256-O1XDr7EWbRp%2BkHrNNgLWgIrB0/US5wvw9K6RERWAj6I%3D' (2026-02-14)
2026-02-15 06:59:44 +00:00
github-actions[bot]
a1e803a023 [create-pull-request] automated change 2026-02-12 07:10:13 +00:00
github-actions[bot]
b362614076 flake.lock: Update
Flake lock file updates:

• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/2db38e08fdadcc0ce3232f7279bab59a15b94482?narHash=sha256-1jZvgZoAagZZB6NwGRv2T2ezPy%2BX6EFDsJm%2BYSlsvEs%3D' (2026-02-09)
  → 'github:NixOS/nixpkgs/6c5e707c6b5339359a9a9e215c5e66d6d802fd7a?narHash=sha256-iKZMkr6Cm9JzWlRYW/VPoL0A9jVKtZYiU4zSrVeetIs%3D' (2026-02-11)
2026-02-12 07:10:12 +00:00
github-actions[bot]
1376f8ddc5 [create-pull-request] automated change 2026-02-11 07:11:50 +00:00
github-actions[bot]
2863733742 flake.lock: Update
Flake lock file updates:

• Updated input 'fran':
    'github:dwinkler1/fran/a3879317519fd3685f3b7679a1de4c5ae65a7cb9?narHash=sha256-czGb4RwTBahNNK9S7ySXeTWIrn/jKH%2B74hN/uIS2XrM%3D' (2026-01-19)
  → 'github:dwinkler1/fran/c5c7f360c7954b422918b2136087f5d3a8f4937f?narHash=sha256-3LWIQnTBSV3eMliFhk1K5cEAJokJVnnoChY0lcDzqNM%3D' (2026-02-10)
• Updated input 'nixpkgs':
    'github:NixOS/nixpkgs/fa83fd837f3098e3e678e6cf017b2b36102c7211?narHash=sha256-e7VO/kGLgRMbWtpBqdWl0uFg8Y2XWFMdz0uUJvlML8o%3D' (2026-01-28)
  → 'github:NixOS/nixpkgs/2db38e08fdadcc0ce3232f7279bab59a15b94482?narHash=sha256-1jZvgZoAagZZB6NwGRv2T2ezPy%2BX6EFDsJm%2BYSlsvEs%3D' (2026-02-09)
• Updated input 'nvimConfig':
    'github:dwinkler1/nvimConfig/f0d0d3c4ec0c0345508ac3217ec9bf999335fef4?narHash=sha256-skscpI6AkHV93iecNah21HSVr59AEGimA51kmQ7UOtg%3D' (2026-01-30)
  → 'github:dwinkler1/nvimConfig/8f5c05252e914cb3738039a7ec13eb7d5955227a?narHash=sha256-gem34C89cocBGuWLj7cdrAS5WkrOBp6V%2BycQM/RhcCw%3D' (2026-02-04)
• Updated input 'rixpkgs':
    'github:rstats-on-nix/nixpkgs/4cf98f12168c1974a040ea34756f8dec5cfc793e?narHash=sha256-Z63gLlvj2WnJoi/3/3oOLBipuYII%2BsfTT1C%2B8BTt%2B5c%3D' (2026-01-26)
  → 'github:rstats-on-nix/nixpkgs/0d3fe7afce51d2126fdccf0b717d8048b90e4781?narHash=sha256-Pi8f3LPTFmG7SZeAJEAamOWly1SZhEofT92uBqS4atY%3D' (2026-02-02)
2026-02-11 07:11:49 +00:00
Daniel Winkler
5646308c21 reorganization 2026-01-31 03:09:40 +11:00
Daniel Winkler
0d7caccf06 allow extra runtime deps 2026-01-31 02:56:31 +11:00
Daniel Winkler
a337a9cf1e do track R files 2026-01-31 02:39:43 +11:00
Daniel Winkler
785cdaaa91 added env vars 2026-01-31 02:38:50 +11:00
Daniel Winkler
94b25e5b5c corrected override inputs 2026-01-31 00:46:27 +11:00
f561def1a6
Merge pull request #66 from dwinkler1/update_rde
Update RDE flake.lock
2026-01-27 15:51:44 +11:00
github-actions[bot]
8d6ea0b0d5 [create-pull-request] automated change 2026-01-27 00:26:17 +00:00
d22cc8f331
Remove nvimcom input from fran in flake.nix
Removed nvimcom input from fran configuration.
2026-01-27 11:25:26 +11:00
github-actions[bot]
0f7687bc39 [create-pull-request] automated change 2026-01-24 06:40:55 +00:00
github-actions[bot]
c703bf420a [create-pull-request] automated change 2026-01-18 06:39:48 +00:00
c3bc8f74a6 Cleanup 2026-01-16 19:47:23 +11:00
39311f1822 Update 2026-01-16 19:13:55 +11:00
beda7e9069
Merge pull request #57 from dwinkler1/update_rde 2026-01-13 21:40:25 +11:00
copilot-swe-agent[bot]
8efae381e9 Make quarto and uv available directly in dev shell
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-13 10:14:44 +00:00
github-actions[bot]
703690472a [create-pull-request] automated change 2026-01-13 06:43:33 +00:00
copilot-swe-agent[bot]
0514ba1283 Add comprehensive CI documentation to README files
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 20:34:23 +00:00
copilot-swe-agent[bot]
0273515951 Add robust command availability checks to all shell scripts
- Add check for @defaultPackageName@-devenv in activateDevenv.sh
- Add check for uv command in initPython.sh
- Add check for git command in initProject.sh (with graceful degradation)
- Add checks for wget, sed, nix in updateDeps.sh
- Provide clear error messages when commands are not available
- Prevent scripts from failing with cryptic errors when tools are missing

Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 20:11:12 +00:00
copilot-swe-agent[bot]
8fc712be60 Remove trailing whitespace from all files (nitpick)
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:58:58 +00:00
copilot-swe-agent[bot]
2a5a1acd62 Fix runtime errors and improve robustness in host configs and scripts
- Fix KeyError in julia.nix when Project.toml lacks deps table
- Fix incorrect uv args in python.nix (remove --run + --add-flags combination)
- Remove redundant 'uv add ipython' from sync branch in python.nix
- Fix relative paths in project-scripts.nix (./scripts -> ../scripts)
- Fix initProject.sh to check file existence before git add
- Add RVER validation in updateDeps.sh with proper error handling
- Add tool availability checks in updateDeps.sh (uv, julia, devenv)
- Add flake.nix backup before modification in updateDeps.sh
- Ensure updateDeps.sh runs from repository root

Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:48:19 +00:00
copilot-swe-agent[bot]
40095ac868 Add comprehensive inline documentation to all modules and enhance README
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:40:13 +00:00
copilot-swe-agent[bot]
c19248f706 Add comprehensive SUMMARY.md with complete refactoring overview
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:33:15 +00:00
copilot-swe-agent[bot]
cc69aa34f8 Add clarifying comments based on code review feedback
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:32:05 +00:00
copilot-swe-agent[bot]
496c238a12 Add inline comments and extract Lua config for better clarity
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:30:14 +00:00
copilot-swe-agent[bot]
eaecb56186 Extract shell hook to lib/shell-hook.nix for better organization
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:28:09 +00:00
copilot-swe-agent[bot]
3398a72241 Refactor template: extract scripts, overlays, and hosts into separate modules
Co-authored-by: dwinkler1 <22460147+dwinkler1@users.noreply.github.com>
2026-01-11 19:26:17 +00:00
github-actions[bot]
52594bfec2 [create-pull-request] automated change 2025-12-18 06:41:49 +00:00
7bb988ef7d fixed R.nvim 2025-12-11 15:00:29 +11:00
5c22c25853 pin R.nvim to compatible version 2025-12-03 11:33:19 +11:00
github-actions[bot]
8a1f4683e9 [create-pull-request] automated change 2025-10-03 06:34:35 +00:00
github-actions[bot]
c70cb27d3d [create-pull-request] automated change 2025-09-30 06:37:00 +00:00
github-actions[bot]
8c6f283cde [create-pull-request] automated change 2025-09-29 06:37:36 +00:00