diff --git a/templates/ed/flake.lock b/templates/ed/flake.lock
index 4ee3d8f..e74737d 100644
--- a/templates/ed/flake.lock
+++ b/templates/ed/flake.lock
@@ -22,16 +22,16 @@
     },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1776734388,
-        "narHash": "sha256-vl3dkhlE5gzsItuHoEMVe+DlonsK+0836LIRDnm6MXQ=",
+        "lastModified": 1776548001,
+        "narHash": "sha256-ZSK0NL4a1BwVbbTBoSnWgbJy9HeZFXLYQizjb2DPF24=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "10e7ad5bbcb421fe07e3a4ad53a634b0cd57ffac",
+        "rev": "b12141ef619e0a9c1c84dc8c684040326f27cdcc",
         "type": "github"
       },
       "original": {
         "owner": "NixOS",
-        "ref": "nixos-25.11",
+        "ref": "nixos-unstable",
         "repo": "nixpkgs",
         "type": "github"
       }
@@ -45,7 +45,9 @@
           "nixpkgs"
         ],
         "plugins-cmp-pandoc-references": "plugins-cmp-pandoc-references",
-        "plugins-r": "plugins-r",
+        "plugins-r": [
+          "plugins-r"
+        ],
         "rixpkgs": [
           "rixpkgs"
         ],
@@ -84,15 +86,16 @@
     "plugins-r": {
       "flake": false,
       "locked": {
-        "lastModified": 1776340770,
-        "narHash": "sha256-o/8UZIc/Bq9dWTjA+MpSR5uMUpE7KHTErk+TwWID8Ww=",
+        "lastModified": 1769881528,
+        "narHash": "sha256-oQSHHu6filJkAyH94yEvyTVuxA+5MU2dMOEAnsIjJKQ=",
         "owner": "R-nvim",
         "repo": "R.nvim",
-        "rev": "b9cfffeb9b4e484aa9e13f01c0eb80230aada455",
+        "rev": "958b472d763cb258927c7ef69af4fd9945cc5469",
         "type": "github"
       },
       "original": {
         "owner": "R-nvim",
+        "ref": "v0.99.3",
         "repo": "R.nvim",
         "type": "github"
       }
@@ -118,6 +121,7 @@
         "fran": "fran",
         "nixpkgs": "nixpkgs",
         "nvimConfig": "nvimConfig",
+        "plugins-r": "plugins-r",
         "rixpkgs": "rixpkgs"
       }
     },
diff --git a/templates/ed/flake.nix b/templates/ed/flake.nix
index 46b9141..08a618d 100644
--- a/templates/ed/flake.nix
+++ b/templates/ed/flake.nix
@@ -114,7 +114,7 @@
   };
 
   inputs = {
-    nixpkgs.url = "github:NixOS/nixpkgs/nixos-25.11";
+    nixpkgs.url = "github:NixOS/nixpkgs/nixos-unstable";
     rixpkgs.url = "github:dwinkler1/rixpkgs/nixpkgs";
     fran = {
       url = "github:dwinkler1/fran";
@@ -128,7 +128,12 @@
         rixpkgs.follows = "rixpkgs";
         nixpkgs.follows = "nixpkgs";
         fran.follows = "fran";
+        "plugins-r".follows = "plugins-r";
       };
     };
+    "plugins-r" = {
+      url = "github:R-nvim/R.nvim/v0.99.3";
+      flake = false;
+    };
   };
 }
diff --git a/templates/rde/flake.lock b/templates/rde/flake.lock
index affeb92..ffa7f0b 100644
--- a/templates/rde/flake.lock
+++ b/templates/rde/flake.lock
@@ -138,11 +138,11 @@
     },
     "rixpkgs": {
       "locked": {
-        "lastModified": 1776883521,
-        "narHash": "sha256-V8H9n8po6HsQ7EAc2D175d3XgGoxrkZ5kYuOBc35oCc=",
+        "lastModified": 1776958221,
+        "narHash": "sha256-cOHLrMWifj8HQMIG6gMhGowwPAkyX/kijDx38wK8kUM=",
         "owner": "rstats-on-nix",
         "repo": "nixpkgs",
-        "rev": "2f3145a4354d02433ac0a432e9917fbba1abeee8",
+        "rev": "db90c554b7172188324b84deea35ed5975e20e44",
         "type": "github"
       },
       "original": {