init wrapper-module config

plugin/21_datascience.lua

@@ -0,0 +1,104 @@
+local now = MiniDeps.now
+local now_if_args = Config.now_if_args
+local later = MiniDeps.later
+local add = Config.add
+local nix = require('config.nix')
+
+if not Config.isNixCats then
+  local m_add = MiniDeps.add
+
+  now(function()
+    m_add({ source = "R-nvim/R.nvim" })
+  end)
+
+  now_if_args(function()
+    m_add({ source = "jmbuhr/otter.nvim" })
+  end)
+
+  later(function()
+    m_add({ source = "jpalardy/vim-slime" })
+  end)
+end
+
+-- terminal
+later(function()
+  vim.g.slime_target = "neovim"
+  vim.g.slime_no_mappings = true
+  add("vim-slime")
+  vim.g.slime_cell_delimiter = vim.g.slime_cell_delimiter or "# %%"
+  vim.g.slime_bracketed_paste = Config.opt_bracket
+  vim.g.slime_input_pid = false
+  vim.g.slime_suggest_default = true
+  vim.g.slime_menu_config = false
+  vim.g.slime_neovim_ignore_unlisted = false
+
+  -- Define standard slime mappings
+  vim.keymap.set("v", "<CR>", "<Plug>SlimeRegionSend", { noremap = true })
+  vim.keymap.set("v", "<localleader><localleader>", "<Plug>SlimeRegionSend", { noremap = true })
+  vim.keymap.set("n", "<localleader><localleader>", "<Plug>SlimeLineSend", { noremap = true })
+  -- Standardize on C-c C-c as well (common convention)
+  vim.keymap.set("v", "<C-c><C-c>", "<Plug>SlimeRegionSend", { noremap = true })
+  vim.keymap.set("n", "<C-c><C-c>", "<Plug>SlimeParagraphSend", { noremap = true })
+end)
+
+-- r
+now(function()
+  if nix.get_cat("r", false) then
+    vim.g.rout_follow_colorscheme = true
+    require("r").setup({
+      -- Create a table with the options to be passed to setup()
+      R_args = { "--quiet", "--no-save" },
+      auto_start = "no",
+      objbr_auto_start = false,
+      objbr_place = 'console,below',
+      rconsole_width = 120,
+      min_editor_width = 80,
+      rconsole_height = 20,
+      nvimpager = "split_h",
+      pdfviewer = "zathura",
+    })
+  end
+end)
+
+
+-- Quarto
+now(function()
+  vim.treesitter.language.register("markdown", { "quarto", "rmd" })
+
+  vim.api.nvim_create_autocmd("FileType", {
+    pattern = { "quarto" },
+    callback = function()
+      require("otter").activate()
+    end,
+  })
+
+  require("otter").setup({
+    lsp = {
+      diagnostic_update_events = { "BufWritePost", "InsertLeave" },
+    },
+    buffers = {
+      set_filetype = true,
+      write_to_disk = true,
+    },
+  })
+end)
+
+later(function()
+  require("quarto").setup({
+    lspFeatures = {
+      enabled = true,
+      languages = { "r", "python", "julia" },
+      diagnostics = {
+        enabled = true,
+        triggers = { "BufWrite" },
+      },
+      completion = {
+        enabled = true,
+      },
+    },
+    codeRunner = {
+      enabled = true,
+      default_method = "slime",
+    },
+  })
+end)